Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.58■□□□□ 0.08
Dchs1E9PVD3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Dchs1E9PVD3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Gm43347-201ENSMUST00000200226 580 ntBASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Tgds-204ENSMUST00000228543 1594 ntBASIC15.57■□□□□ 0.08
Dchs1E9PVD3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.56■□□□□ 0.08
Dchs1E9PVD3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Gm11950-201ENSMUST00000121615 838 ntBASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Dchs1E9PVD3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm37935-201ENSMUST00000192012 982 ntBASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm13474-201ENSMUST00000122466 815 ntBASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Dchs1E9PVD3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Gm15794-201ENSMUST00000120182 631 ntBASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Dchs1E9PVD3 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Dchs1E9PVD3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Dchs1E9PVD3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms