Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm27741-201ENSMUST00000185060 237 ntBASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3854A0A1B0GSS6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3854A0A1B0GSS6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Gm27389-201ENSMUST00000183622 195 ntBASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3854A0A1B0GSS6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Gm3854A0A1B0GSS6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm9103-201ENSMUST00000119371 405 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm7284-201ENSMUST00000131667 944 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm7370-201ENSMUST00000219471 767 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm21559-201ENSMUST00000220638 855 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm8587-201ENSMUST00000076538 843 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3854A0A1B0GSS6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Ank2-226ENSMUST00000189368 339 ntBASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gm3854A0A1B0GSS6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms