Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13n-2A0A0G2JF93 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13n-2A0A0G2JF93 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms