Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Rab3c-203ENSMUST00000224180 967 ntBASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv19A0A0B4J1H4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv19A0A0B4J1H4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm29791-202ENSMUST00000207888 369 ntBASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv19A0A0B4J1H4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv19A0A0B4J1H4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv19A0A0B4J1H4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms