Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv16A0A0B4J1H3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.75□□□□□ -0.37
Trbv16A0A0B4J1H3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Mir8112-201ENSMUST00000184382 131 ntBASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm38285-201ENSMUST00000192928 922 ntBASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm18671-201ENSMUST00000214826 683 ntBASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv16A0A0B4J1H3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm10033-202ENSMUST00000211874 928 ntBASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trbv16A0A0B4J1H3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms