Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Dancr-204ENSMUST00000132389 2347 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Reep4-203ENSMUST00000226563 1444 ntBASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm13234-201ENSMUST00000120010 747 ntBASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.8□□□□□ -0.2
Trbv1A0A0B4J1G7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm5874-201ENSMUST00000096101 508 ntBASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv1A0A0B4J1G7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm15039-201ENSMUST00000118914 875 ntBASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv1A0A0B4J1G7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms