Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbc1A0A0A6YWV4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbc1A0A0A6YWV4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbc1A0A0A6YWV4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trbc1A0A0A6YWV4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbc1A0A0A6YWV4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm10698-201ENSMUST00000182663 604 ntBASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbc1A0A0A6YWV4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbc1A0A0A6YWV4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbc1A0A0A6YWV4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms