Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm18671-201ENSMUST00000214826 683 ntBASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-23A0A0A6YVW3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-23A0A0A6YVW3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms