Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-5A0A075B6B9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-5A0A075B6B9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-5A0A075B6B9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm21956-201ENSMUST00000179946 522 ntBASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Gm13241-201ENSMUST00000094493 780 ntBASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-5A0A075B6B9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-5A0A075B6B9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-5A0A075B6B9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav6d-5A0A075B6B9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-5A0A075B6B9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-5A0A075B6B9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms