Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12-3A0A075B648 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12-3A0A075B648 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-3A0A075B648 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-3A0A075B648 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-3A0A075B648 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-3A0A075B648 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.83□□□□□ -0.35
Trav12-3A0A075B648 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-3A0A075B648 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-3A0A075B648 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms