Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm13241-201ENSMUST00000094493 780 ntBASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav16nA0A075B634 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16nA0A075B634 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16nA0A075B634 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16nA0A075B634 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16nA0A075B634 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16nA0A075B634 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16nA0A075B634 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Gm22325-201ENSMUST00000158904 308 ntBASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16nA0A075B634 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms