Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-1A0A075B606 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-1A0A075B606 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13d-1A0A075B606 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.89□□□□□ -0.35
Trav13d-1A0A075B606 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-1A0A075B606 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm38285-201ENSMUST00000192928 922 ntBASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm10138-203ENSMUST00000206952 366 ntBASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-1A0A075B606 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms