Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm24709-201ENSMUST00000104123 132 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm22714-201ENSMUST00000116894 78 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm11386-201ENSMUST00000117761 347 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm8475-201ENSMUST00000118211 526 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm13785-201ENSMUST00000119099 690 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm14294-201ENSMUST00000119749 751 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm14534-201ENSMUST00000120045 357 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm14784-201ENSMUST00000121604 663 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm22101-201ENSMUST00000157928 103 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm6541-201ENSMUST00000165542 561 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm26335-201ENSMUST00000178449 107 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm4845-201ENSMUST00000179202 562 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm28579-201ENSMUST00000186143 369 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm29489-201ENSMUST00000188934 324 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm38097-201ENSMUST00000192936 439 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm37111-201ENSMUST00000193250 634 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Mir142-201ENSMUST00000198092 64 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm45063-201ENSMUST00000203726 472 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm3565-201ENSMUST00000222670 609 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rnf111Q99ML9 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm24272-201ENSMUST00000102329 98 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm25111-201ENSMUST00000116686 147 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm22952-201ENSMUST00000116720 120 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm14575-201ENSMUST00000117210 560 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm14172-201ENSMUST00000118255 644 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm12891-201ENSMUST00000119358 240 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm12322-201ENSMUST00000121605 389 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm16331-201ENSMUST00000144274 498 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm3141-201ENSMUST00000168726 499 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm24418-201ENSMUST00000177597 79 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm24639-201ENSMUST00000178518 79 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm23076-201ENSMUST00000179082 79 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm25077-201ENSMUST00000179157 79 ntBASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rnf111Q99ML9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms