Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim39Q9ESN2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm43180-201ENSMUST00000197541 2886 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm7108-201ENSMUST00000118038 3407 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm45493-201ENSMUST00000209494 3948 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm42492-201ENSMUST00000195780 2915 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Mir883a-201ENSMUST00000104824 76 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm2178-201ENSMUST00000104927 357 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm14163-201ENSMUST00000117342 217 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm11501-201ENSMUST00000118039 581 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm11784-201ENSMUST00000118568 474 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm13475-201ENSMUST00000119290 234 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm5405-201ENSMUST00000120478 609 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm13877-201ENSMUST00000120614 417 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm16179-201ENSMUST00000120685 373 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm25784-201ENSMUST00000122524 81 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm16330-201ENSMUST00000128324 297 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm22563-201ENSMUST00000157333 269 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm23332-201ENSMUST00000157424 275 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm22857-201ENSMUST00000174969 134 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm9569-201ENSMUST00000187492 787 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm37493-201ENSMUST00000193167 433 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm3549-201ENSMUST00000203873 794 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm45899-201ENSMUST00000212196 1276 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm45814-201ENSMUST00000212646 775 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm31711-201ENSMUST00000220687 196 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm46996-201ENSMUST00000220924 408 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 AC161275.1-201ENSMUST00000224668 208 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm5582-201ENSMUST00000075251 522 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm23503-201ENSMUST00000083903 107 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm37926-201ENSMUST00000191922 2424 ntBASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim39Q9ESN2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Trim39Q9ESN2 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Snord88a-201ENSMUST00000116723 90 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm14558-201ENSMUST00000117458 381 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm14594-201ENSMUST00000118052 537 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm14590-201ENSMUST00000118934 537 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm12135-201ENSMUST00000119170 466 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm11197-201ENSMUST00000145158 839 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm4487-201ENSMUST00000150617 442 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms