Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.58□□□□□ -1.2
Col17a1Q07563 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col17a1Q07563 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm5383-201ENSMUST00000121177 617 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm12095-201ENSMUST00000121962 816 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm37989-201ENSMUST00000195202 803 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Mir6516-201ENSMUST00000196236 110 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm43390-201ENSMUST00000196614 421 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm44181-201ENSMUST00000203106 483 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm45171-201ENSMUST00000206360 736 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.57□□□□□ -1.2
Col17a1Q07563 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col17a1Q07563 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.57□□□□□ -1.2
Col17a1Q07563 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col17a1Q07563 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col17a1Q07563 Gm43485-201ENSMUST00000199292 1710 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm26143-201ENSMUST00000104480 108 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm12096-201ENSMUST00000121149 829 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm4479-201ENSMUST00000178807 171 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm37081-201ENSMUST00000192034 196 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm18598-201ENSMUST00000207724 597 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm18160-201ENSMUST00000214279 827 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 AC108945.1-201ENSMUST00000226477 94 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm36963-201ENSMUST00000193506 2324 ntBASIC7.56□□□□□ -1.2
Col17a1Q07563 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col17a1Q07563 Gm13250-201ENSMUST00000117209 753 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm12149-201ENSMUST00000117511 654 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm15166-201ENSMUST00000120790 385 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm24507-201ENSMUST00000157683 134 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm24551-201ENSMUST00000158645 92 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm46136-201ENSMUST00000214730 565 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 AC159476.2-201ENSMUST00000216221 418 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 CT025686.1-201ENSMUST00000227592 438 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC7.55□□□□□ -1.2
Col17a1Q07563 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm18186-201ENSMUST00000192239 1580 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms