Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm15021-201ENSMUST00000117832 742 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm14520-201ENSMUST00000119258 387 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm11278-201ENSMUST00000121002 997 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm11805-201ENSMUST00000121238 600 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm7670-201ENSMUST00000121272 641 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm24444-201ENSMUST00000157244 308 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm17907-201ENSMUST00000173150 710 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm20574-201ENSMUST00000182867 917 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm29454-201ENSMUST00000190805 393 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Mir409-201ENSMUST00000198153 79 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm5317-201ENSMUST00000204445 847 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm45228-201ENSMUST00000206585 352 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm3912-203ENSMUST00000211024 367 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm18892-201ENSMUST00000217628 881 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm23508-201ENSMUST00000083079 72 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm25139-201ENSMUST00000083247 210 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm9386-201ENSMUST00000095195 381 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.05□□□□□ -1.6
Msh4Q99MT2 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Msh4Q99MT2 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm25595-201ENSMUST00000102273 97 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm14163-201ENSMUST00000117342 217 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm25176-201ENSMUST00000122640 125 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm24860-201ENSMUST00000158457 276 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm25413-201ENSMUST00000158544 312 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm37421-201ENSMUST00000193088 132 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm38154-201ENSMUST00000195444 340 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm43979-201ENSMUST00000203179 475 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm44074-201ENSMUST00000204562 337 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18468-201ENSMUST00000207321 369 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18470-201ENSMUST00000207467 420 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18465-201ENSMUST00000207468 369 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18464-201ENSMUST00000207803 420 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18458-201ENSMUST00000207908 369 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm18461-201ENSMUST00000208421 420 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msh4Q99MT2 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC5.04□□□□□ -1.6
Msh4Q99MT2 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.04□□□□□ -1.6
Msh4Q99MT2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms