Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cux1P53564 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cux1P53564 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.94□□□□□ -1.3
Cux1P53564 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.94□□□□□ -1.3
Cux1P53564 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Gm24961-201ENSMUST00000157918 184 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Gm43036-201ENSMUST00000200594 373 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Gm44002-201ENSMUST00000205134 594 ntBASIC6.94□□□□□ -1.3
Cux1P53564 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
Cux1P53564 Gm38152-201ENSMUST00000195389 3566 ntBASIC6.94□□□□□ -1.3
Cux1P53564 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cux1P53564 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cux1P53564 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Cux1P53564 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cux1P53564 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cux1P53564 Gm8666-201ENSMUST00000117517 292 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Gm6584-201ENSMUST00000119671 447 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Gm12340-201ENSMUST00000121617 462 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Gm9294-201ENSMUST00000165198 789 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Gm25999-201ENSMUST00000175398 133 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC6.93□□□□□ -1.3
Cux1P53564 Gm18377-201ENSMUST00000215141 607 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Cux1P53564 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Cux1P53564 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Cux1P53564 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cux1P53564 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cux1P53564 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Cux1P53564 Gm37562-201ENSMUST00000194763 4328 ntBASIC6.93□□□□□ -1.3
Cux1P53564 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Cux1P53564 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cux1P53564 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC6.92□□□□□ -1.3
Cux1P53564 Gm6650-201ENSMUST00000166710 614 ntBASIC6.92□□□□□ -1.3
Cux1P53564 Gm28195-201ENSMUST00000186992 372 ntBASIC6.92□□□□□ -1.3
Cux1P53564 Gm37682-201ENSMUST00000191776 522 ntBASIC6.92□□□□□ -1.3
Cux1P53564 Gm44779-201ENSMUST00000206937 708 ntBASIC6.92□□□□□ -1.3
Cux1P53564 AC164437.2-201ENSMUST00000228915 797 ntBASIC6.92□□□□□ -1.3
Cux1P53564 Mir412-201ENSMUST00000083636 80 ntBASIC6.92□□□□□ -1.3
Cux1P53564 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Cux1P53564 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cux1P53564 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cux1P53564 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm15426-201ENSMUST00000117823 556 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm13162-201ENSMUST00000121481 454 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm12755-201ENSMUST00000122297 282 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm23554-201ENSMUST00000157818 110 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Mir5710-201ENSMUST00000176884 69 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm29031-201ENSMUST00000185316 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm29000-201ENSMUST00000185444 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm28204-201ENSMUST00000185934 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm28290-201ENSMUST00000186505 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm28161-201ENSMUST00000186669 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm28749-209ENSMUST00000189599 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm38270-201ENSMUST00000192721 407 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm33163-201ENSMUST00000194504 614 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm17779-201ENSMUST00000213395 394 ntBASIC6.91□□□□□ -1.3
Cux1P53564 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.91□□□□□ -1.3
Cux1P53564 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 AC159231.1-201ENSMUST00000225365 226 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Cux1P53564 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms