Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Gm45222-201ENSMUST00000207029 4307 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.5□□□□□ -1.37
Trim28Q62318 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim28Q62318 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Trim28Q62318 Gm24340-201ENSMUST00000104208 97 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Gm12387-201ENSMUST00000118573 955 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Gm14463-201ENSMUST00000121117 498 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Gm26424-201ENSMUST00000122530 104 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Gm27690-201ENSMUST00000184596 126 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim28Q62318 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 AC109180.1-201ENSMUST00000218676 398 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 AC156798.1-201ENSMUST00000220508 224 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim28Q62318 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim28Q62318 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Trim28Q62318 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim28Q62318 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.49□□□□□ -1.37
Trim28Q62318 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim28Q62318 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm22272-201ENSMUST00000104039 134 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm26146-201ENSMUST00000104478 185 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm5353-201ENSMUST00000139800 793 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm25846-201ENSMUST00000158013 135 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm16589-201ENSMUST00000159522 918 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm43350-201ENSMUST00000196382 711 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim28Q62318 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim28Q62318 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim28Q62318 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms