Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm12261-201ENSMUST00000117499 645 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm15385-201ENSMUST00000118725 667 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm15166-201ENSMUST00000120790 385 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm13578-201ENSMUST00000120849 590 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm13363-201ENSMUST00000122008 522 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm4660-201ENSMUST00000131499 403 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm22916-201ENSMUST00000157616 119 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm22555-201ENSMUST00000157801 62 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm24860-201ENSMUST00000158457 276 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm24734-201ENSMUST00000158860 262 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm23737-201ENSMUST00000082547 159 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm24623-201ENSMUST00000082616 194 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm25403-201ENSMUST00000082971 143 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm6982-201ENSMUST00000118752 1560 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm25795-201ENSMUST00000104421 132 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm11561-201ENSMUST00000117429 417 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm13607-201ENSMUST00000117875 539 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm12850-201ENSMUST00000119210 436 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm12994-201ENSMUST00000119601 447 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm14679-201ENSMUST00000121536 722 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm14162-201ENSMUST00000121985 601 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm25106-201ENSMUST00000122672 134 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm25981-201ENSMUST00000157921 295 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Scarna10-201ENSMUST00000158992 325 ntBASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim8Q99PJ2 Gm27512-201ENSMUST00000175328 126 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms