Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm43428-201ENSMUST00000200108 3845 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Klf10-202ENSMUST00000226363 2917 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm16409-201ENSMUST00000100510 747 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm11576-201ENSMUST00000117433 417 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm8172-201ENSMUST00000120762 750 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm13282-201ENSMUST00000121577 545 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm24392-201ENSMUST00000158136 103 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm24006-201ENSMUST00000158462 132 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm22202-201ENSMUST00000158608 311 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm24667-201ENSMUST00000158938 103 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Mir6346-201ENSMUST00000183982 81 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Mir6238-201ENSMUST00000184140 129 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm7181-201ENSMUST00000202197 434 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm19244-201ENSMUST00000204340 253 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim35Q8C006 CR974592.1-201ENSMUST00000220422 574 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm10123-201ENSMUST00000075723 490 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Gm26003-201ENSMUST00000083061 113 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Trim35Q8C006 AC122887.1-201ENSMUST00000219265 2722 ntBASIC7.98□□□□□ -1.13
Trim35Q8C006 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim35Q8C006 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim35Q8C006 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm12550-201ENSMUST00000118478 329 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm12852-201ENSMUST00000119478 719 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm16017-201ENSMUST00000119834 208 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm15028-201ENSMUST00000120295 370 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm24011-201ENSMUST00000157732 268 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm9556-201ENSMUST00000182938 940 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim35Q8C006 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm29330-201ENSMUST00000190032 699 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm42667-201ENSMUST00000196132 234 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm23604-202ENSMUST00000198428 137 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Mir1a-2-201ENSMUST00000198520 72 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.97□□□□□ -1.13
Trim35Q8C006 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 AC159380.1-201ENSMUST00000218096 121 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 AC173345.2-201ENSMUST00000222795 153 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 AC183092.1-201ENSMUST00000224301 153 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm22509-201ENSMUST00000082775 107 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.97□□□□□ -1.13
Trim35Q8C006 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim35Q8C006 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms