Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 Gm22569-201ENSMUST00000175545 124 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Gm29428-201ENSMUST00000190086 409 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.08□□□□□ -1.76
Rif1Q6PR54 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rif1Q6PR54 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm10444-201ENSMUST00000126708 148 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29320-201ENSMUST00000185235 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29179-202ENSMUST00000186138 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm28598-201ENSMUST00000186490 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29448-201ENSMUST00000186675 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29314-201ENSMUST00000186800 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm28253-202ENSMUST00000187971 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29268-201ENSMUST00000188669 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm29169-201ENSMUST00000189835 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm28957-201ENSMUST00000190174 373 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm28978-201ENSMUST00000191120 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm37172-201ENSMUST00000191926 615 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm15780-201ENSMUST00000121283 935 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm12322-201ENSMUST00000121605 389 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm7786-201ENSMUST00000210494 436 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Rif1Q6PR54 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm27883-201ENSMUST00000183941 102 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 AC156163.1-201ENSMUST00000215598 3369 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 AC139754.2-201ENSMUST00000218037 1455 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm12423-201ENSMUST00000118334 135 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm23959-201ENSMUST00000157208 324 ntBASIC4.06□□□□□ -1.76
Rif1Q6PR54 Gm26088-201ENSMUST00000157896 131 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms