Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm37095-201ENSMUST00000195421 205 ntBASIC5.32□□□□□ -1.56
Col2a1P28481 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm9616-201ENSMUST00000221154 781 ntBASIC5.32□□□□□ -1.56
Col2a1P28481 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.32□□□□□ -1.56
Col2a1P28481 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.32□□□□□ -1.56
Col2a1P28481 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.32□□□□□ -1.56
Col2a1P28481 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col2a1P28481 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col2a1P28481 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col2a1P28481 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col2a1P28481 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col2a1P28481 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col2a1P28481 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col2a1P28481 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col2a1P28481 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col2a1P28481 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm13615-201ENSMUST00000120242 1612 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.31□□□□□ -1.56
Col2a1P28481 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm12852-201ENSMUST00000119478 719 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm17046-201ENSMUST00000168078 850 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm19124-201ENSMUST00000191041 832 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm44261-201ENSMUST00000203337 209 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm45499-201ENSMUST00000211656 280 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col2a1P28481 Snord59a-201ENSMUST00000082844 74 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.31□□□□□ -1.56
Col2a1P28481 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col2a1P28481 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col2a1P28481 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col2a1P28481 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col2a1P28481 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col2a1P28481 Gm16394-201ENSMUST00000117289 675 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm14628-201ENSMUST00000117508 635 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm14750-201ENSMUST00000118262 516 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm15385-201ENSMUST00000118725 667 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm9308-201ENSMUST00000119073 448 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm14775-201ENSMUST00000122089 310 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Gm9294-201ENSMUST00000165198 789 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.3□□□□□ -1.56
Col2a1P28481 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col2a1P28481 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.3□□□□□ -1.56
Col2a1P28481 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Col2a1P28481 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col2a1P28481 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Col2a1P28481 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col2a1P28481 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm22536-201ENSMUST00000158171 134 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm3077-201ENSMUST00000165903 627 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Gm43710-201ENSMUST00000199583 452 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.29□□□□□ -1.56
Col2a1P28481 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col2a1P28481 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms