Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn3Q9Z0G9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cldn3Q9Z0G9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn3Q9Z0G9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn3Q9Z0G9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn3Q9Z0G9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn3Q9Z0G9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.8■□□□□ 0.44
Cldn3Q9Z0G9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn3Q9Z0G9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms