Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcdnQ9Z0E0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.56■□□□□ 0.4
NcdnQ9Z0E0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NcdnQ9Z0E0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NcdnQ9Z0E0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NcdnQ9Z0E0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Gm5864-201ENSMUST00000202263 970 ntBASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NcdnQ9Z0E0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Mir8098-201ENSMUST00000184011 137 ntBASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NcdnQ9Z0E0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.53■□□□□ 0.4
NcdnQ9Z0E0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Gm27742-201ENSMUST00000184667 60 ntBASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Gm37935-201ENSMUST00000192012 982 ntBASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcdnQ9Z0E0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcdnQ9Z0E0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcdnQ9Z0E0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcdnQ9Z0E0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms