Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl28Q9JIL2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Idnk-204ENSMUST00000226010 1898 ntBASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Gm10849-201ENSMUST00000100397 618 ntBASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl28Q9JIL2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl28Q9JIL2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl28Q9JIL2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Gm7291-201ENSMUST00000199147 382 ntBASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms