Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OtofQ9ESF1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.53■□□□□ 0.4
OtofQ9ESF1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.53■□□□□ 0.4
OtofQ9ESF1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
OtofQ9ESF1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
OtofQ9ESF1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OtofQ9ESF1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.52■□□□□ 0.4
OtofQ9ESF1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
OtofQ9ESF1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
OtofQ9ESF1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
OtofQ9ESF1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
OtofQ9ESF1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtofQ9ESF1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.52■□□□□ 0.39
OtofQ9ESF1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtofQ9ESF1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
OtofQ9ESF1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.51■□□□□ 0.39
OtofQ9ESF1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
OtofQ9ESF1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.5■□□□□ 0.39
OtofQ9ESF1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
OtofQ9ESF1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Gm17661-201ENSMUST00000170317 270 ntBASIC17.49■□□□□ 0.39
OtofQ9ESF1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
OtofQ9ESF1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms