Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.68□□□□□ -0.06
Ssbp3Q9D032 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ssbp3Q9D032 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp3Q9D032 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Tgds-204ENSMUST00000228543 1594 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Gm715-201ENSMUST00000117865 831 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Mir2861-201ENSMUST00000175539 82 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp3Q9D032 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Gm37292-201ENSMUST00000192062 758 ntBASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp3Q9D032 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ssbp3Q9D032 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssbp3Q9D032 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssbp3Q9D032 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms