Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx47Q9CWX9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx47Q9CWX9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx47Q9CWX9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx47Q9CWX9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.14■□□□□ 0.5
Ddx47Q9CWX9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx47Q9CWX9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ddx47Q9CWX9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.14■□□□□ 0.49
Ddx47Q9CWX9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx47Q9CWX9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms