Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldnd1Q9CQX5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm25925-201ENSMUST00000158314 306 ntBASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm28659-201ENSMUST00000188013 759 ntBASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.06■□□□□ 0.48
Cldnd1Q9CQX5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Gm34391-201ENSMUST00000203706 907 ntBASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Gm29791-202ENSMUST00000207888 369 ntBASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.05■□□□□ 0.48
Cldnd1Q9CQX5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Gm37722-201ENSMUST00000193757 208 ntBASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Gm45328-201ENSMUST00000210942 917 ntBASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cldnd1Q9CQX5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldnd1Q9CQX5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldnd1Q9CQX5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.02■□□□□ 0.48
Cldnd1Q9CQX5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cldnd1Q9CQX5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldnd1Q9CQX5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms