Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Gm7860-201ENSMUST00000121190 879 ntBASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RTRAFQ9CQE8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.4□□□□□ -0.1
RTRAFQ9CQE8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RTRAFQ9CQE8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RTRAFQ9CQE8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Tgds-204ENSMUST00000228543 1594 ntBASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RTRAFQ9CQE8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms