Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col25a1Q99MQ5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col25a1Q99MQ5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col25a1Q99MQ5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col25a1Q99MQ5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gm14057-201ENSMUST00000120631 482 ntBASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gm5264-201ENSMUST00000190584 848 ntBASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gm38027-201ENSMUST00000192315 235 ntBASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col25a1Q99MQ5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col25a1Q99MQ5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Gm13474-201ENSMUST00000122466 815 ntBASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col25a1Q99MQ5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Gm2651-201ENSMUST00000203560 838 ntBASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col25a1Q99MQ5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Gm1401-201ENSMUST00000122048 772 ntBASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col25a1Q99MQ5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms