Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm11249-201ENSMUST00000117071 859 ntBASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm10698-201ENSMUST00000182663 604 ntBASIC16.37■□□□□ 0.21
Cdca3Q99M54 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm9987-201ENSMUST00000069768 567 ntBASIC16.37■□□□□ 0.21
Cdca3Q99M54 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.37■□□□□ 0.21
Cdca3Q99M54 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdca3Q99M54 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.36■□□□□ 0.21
Cdca3Q99M54 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdca3Q99M54 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.35■□□□□ 0.21
Cdca3Q99M54 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm2399-201ENSMUST00000104944 225 ntBASIC16.35■□□□□ 0.21
Cdca3Q99M54 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm44549-201ENSMUST00000208351 577 ntBASIC16.35■□□□□ 0.21
Cdca3Q99M54 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.35■□□□□ 0.21
Cdca3Q99M54 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.35■□□□□ 0.21
Cdca3Q99M54 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Tgds-204ENSMUST00000228543 1594 ntBASIC16.34■□□□□ 0.21
Cdca3Q99M54 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdca3Q99M54 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cdca3Q99M54 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms