Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Dancr-204ENSMUST00000132389 2347 ntBASIC17.78■□□□□ 0.44
Cdk9Q99J95 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.78■□□□□ 0.44
Cdk9Q99J95 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Cdk9Q99J95 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdk9Q99J95 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cdk9Q99J95 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.77■□□□□ 0.43
Cdk9Q99J95 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
Cdk9Q99J95 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Gm18284-201ENSMUST00000172604 624 ntBASIC17.76■□□□□ 0.43
Cdk9Q99J95 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdk9Q99J95 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.75■□□□□ 0.43
Cdk9Q99J95 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk9Q99J95 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Gm8495-201ENSMUST00000188740 694 ntBASIC17.74■□□□□ 0.43
Cdk9Q99J95 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk9Q99J95 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.73■□□□□ 0.43
Cdk9Q99J95 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk9Q99J95 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk9Q99J95 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms