Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.32■□□□□ 0.84
Smc1bQ920F6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Gm18025-201ENSMUST00000221733 862 ntBASIC20.32■□□□□ 0.84
Smc1bQ920F6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.32■□□□□ 0.84
Smc1bQ920F6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc1bQ920F6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Gm3375-201ENSMUST00000203929 796 ntBASIC20.31■□□□□ 0.84
Smc1bQ920F6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.31■□□□□ 0.84
Smc1bQ920F6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc1bQ920F6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc1bQ920F6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Gm23634-201ENSMUST00000175071 91 ntBASIC20.29■□□□□ 0.84
Smc1bQ920F6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.29■□□□□ 0.84
Smc1bQ920F6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Zfp783-201ENSMUST00000095946 670 ntBASIC20.29■□□□□ 0.84
Smc1bQ920F6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc1bQ920F6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Gm42545-201ENSMUST00000202755 922 ntBASIC20.28■□□□□ 0.84
Smc1bQ920F6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc1bQ920F6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.27■□□□□ 0.84
Smc1bQ920F6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Gm15375-201ENSMUST00000119510 849 ntBASIC20.27■□□□□ 0.84
Smc1bQ920F6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.27■□□□□ 0.84
Smc1bQ920F6 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.27■□□□□ 0.84
Smc1bQ920F6 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.27■□□□□ 0.84
Smc1bQ920F6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.27■□□□□ 0.84
Smc1bQ920F6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc1bQ920F6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc1bQ920F6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.26■□□□□ 0.83
Smc1bQ920F6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms