Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha9Q91Y11 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha9Q91Y11 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdha9Q91Y11 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha9Q91Y11 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Gm10812-201ENSMUST00000099864 546 ntBASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha9Q91Y11 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha9Q91Y11 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Gm4974-201ENSMUST00000209974 875 ntBASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Rarb-207ENSMUST00000225921 2756 ntBASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Pcdha9Q91Y11 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms