Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm27525-201ENSMUST00000184465 107 ntBASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm37722-201ENSMUST00000193757 208 ntBASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm18206-201ENSMUST00000207027 926 ntBASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lmcd1Q8VEE1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lmcd1Q8VEE1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lmcd1Q8VEE1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lmcd1Q8VEE1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Gm10418-201ENSMUST00000100943 576 ntBASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lmcd1Q8VEE1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lmcd1Q8VEE1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Gm10566-201ENSMUST00000086739 996 ntBASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lmcd1Q8VEE1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Lmcd1Q8VEE1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms