Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.08□□□□□ -0.64
Cystm1Q8K353 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.08□□□□□ -0.64
Cystm1Q8K353 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.08□□□□□ -0.64
Cystm1Q8K353 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.08□□□□□ -0.64
Cystm1Q8K353 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gm10849-201ENSMUST00000100397 618 ntBASIC11.07□□□□□ -0.64
Cystm1Q8K353 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gm8969-201ENSMUST00000199694 526 ntBASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cystm1Q8K353 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cystm1Q8K353 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.05□□□□□ -0.64
Cystm1Q8K353 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.05□□□□□ -0.64
Cystm1Q8K353 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Gm40848-201ENSMUST00000221998 324 ntBASIC11.05□□□□□ -0.64
Cystm1Q8K353 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cystm1Q8K353 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms