Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh1Q8CGV4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh1Q8CGV4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh1Q8CGV4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh1Q8CGV4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh1Q8CGV4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh1Q8CGV4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms