Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Lysmd4Q8CC84 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Lysmd4Q8CC84 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Gm13234-201ENSMUST00000120010 747 ntBASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Lysmd4Q8CC84 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lysmd4Q8CC84 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Lysmd4Q8CC84 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lysmd4Q8CC84 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lysmd4Q8CC84 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Mir8112-201ENSMUST00000184382 131 ntBASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lysmd4Q8CC84 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms