Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.12■□□□□ 0.33
Cpsf4Q8BQZ5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpsf4Q8BQZ5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.1■□□□□ 0.33
Cpsf4Q8BQZ5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Trmt13-210ENSMUST00000198454 880 ntBASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Gm2559-201ENSMUST00000201323 363 ntBASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cpsf4Q8BQZ5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cpsf4Q8BQZ5 Dio3-201ENSMUST00000097228 1449 ntBASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Gm20760-201ENSMUST00000179197 648 ntBASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4Q8BQZ5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4Q8BQZ5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms