Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.73■□□□□ 0.27
Ckap4Q8BMK4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap4Q8BMK4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap4Q8BMK4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ckap4Q8BMK4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Gm27405-201ENSMUST00000184201 112 ntBASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ckap4Q8BMK4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ckap4Q8BMK4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ckap4Q8BMK4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ckap4Q8BMK4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ckap4Q8BMK4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Gm7290-201ENSMUST00000104990 617 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Gm12918-201ENSMUST00000120234 636 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Gm15710-201ENSMUST00000121821 636 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Gm5075-201ENSMUST00000196916 622 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ckap4Q8BMK4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ckap4Q8BMK4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Gm6365-201ENSMUST00000054711 744 ntBASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms