Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Gm12527-201ENSMUST00000117967 564 ntBASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Gm10653-202ENSMUST00000139570 835 ntBASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Samm50Q8BGH2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.67■□□□□ 0.9
Samm50Q8BGH2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samm50Q8BGH2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samm50Q8BGH2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Samm50Q8BGH2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Samm50Q8BGH2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Samm50Q8BGH2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Samm50Q8BGH2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Samm50Q8BGH2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Gm20760-201ENSMUST00000179197 648 ntBASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Gm44549-201ENSMUST00000208351 577 ntBASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Samm50Q8BGH2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms