Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gm12382-201ENSMUST00000122005 922 ntBASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf38bQ80SY5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38bQ80SY5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gm11927-201ENSMUST00000118472 759 ntBASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gm43183-201ENSMUST00000200632 547 ntBASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38bQ80SY5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Prpf38bQ80SY5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Gm5867-201ENSMUST00000063197 592 ntBASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.35■□□□□ 0.53
Prpf38bQ80SY5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms