Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vma21Q78T54 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vma21Q78T54 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Vma21Q78T54 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vma21Q78T54 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vma21Q78T54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.39□□□□□ -0.11
Vma21Q78T54 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vma21Q78T54 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.38□□□□□ -0.11
Vma21Q78T54 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vma21Q78T54 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.38□□□□□ -0.11
Vma21Q78T54 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.38□□□□□ -0.11
Vma21Q78T54 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Vma21Q78T54 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vma21Q78T54 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vma21Q78T54 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vma21Q78T54 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Vma21Q78T54 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vma21Q78T54 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vma21Q78T54 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vma21Q78T54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Vma21Q78T54 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vma21Q78T54 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.36□□□□□ -0.11
Vma21Q78T54 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.36□□□□□ -0.11
Vma21Q78T54 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vma21Q78T54 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vma21Q78T54 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
Vma21Q78T54 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.35□□□□□ -0.11
Vma21Q78T54 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms