Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShbQ6PD21 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ShbQ6PD21 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ShbQ6PD21 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.13■□□□□ 0.65
ShbQ6PD21 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.13■□□□□ 0.65
ShbQ6PD21 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.13■□□□□ 0.65
ShbQ6PD21 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.13■□□□□ 0.65
ShbQ6PD21 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShbQ6PD21 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShbQ6PD21 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.11■□□□□ 0.65
ShbQ6PD21 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ShbQ6PD21 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShbQ6PD21 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.1■□□□□ 0.65
ShbQ6PD21 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ShbQ6PD21 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ShbQ6PD21 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.1■□□□□ 0.65
ShbQ6PD21 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.1■□□□□ 0.65
ShbQ6PD21 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.1■□□□□ 0.65
ShbQ6PD21 Gm2651-201ENSMUST00000203560 838 ntBASIC19.1■□□□□ 0.65
ShbQ6PD21 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
ShbQ6PD21 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShbQ6PD21 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Gm15372-201ENSMUST00000120729 834 ntBASIC19.09■□□□□ 0.65
ShbQ6PD21 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ShbQ6PD21 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.09■□□□□ 0.65
ShbQ6PD21 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
ShbQ6PD21 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ShbQ6PD21 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.09■□□□□ 0.65
ShbQ6PD21 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ShbQ6PD21 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShbQ6PD21 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShbQ6PD21 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ShbQ6PD21 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ShbQ6PD21 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.08■□□□□ 0.65
ShbQ6PD21 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ShbQ6PD21 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShbQ6PD21 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShbQ6PD21 Tgds-204ENSMUST00000228543 1594 ntBASIC19.08■□□□□ 0.65
ShbQ6PD21 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.08■□□□□ 0.64
ShbQ6PD21 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.08■□□□□ 0.64
ShbQ6PD21 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ShbQ6PD21 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ShbQ6PD21 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShbQ6PD21 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShbQ6PD21 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShbQ6PD21 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
ShbQ6PD21 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.07■□□□□ 0.64
ShbQ6PD21 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.07■□□□□ 0.64
ShbQ6PD21 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms