Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Hmgb4Q6P8W9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb4Q6P8W9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb4Q6P8W9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.47■□□□□ 0.55
Hmgb4Q6P8W9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb4Q6P8W9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.46■□□□□ 0.55
Hmgb4Q6P8W9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.46■□□□□ 0.54
Hmgb4Q6P8W9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb4Q6P8W9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb4Q6P8W9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Gm6433-201ENSMUST00000118634 875 ntBASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb4Q6P8W9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb4Q6P8W9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms