Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VcanQ62059 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.61■□□□□ 0.25
VcanQ62059 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.61■□□□□ 0.25
VcanQ62059 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.61■□□□□ 0.25
VcanQ62059 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VcanQ62059 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VcanQ62059 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.6■□□□□ 0.25
VcanQ62059 Gm5264-201ENSMUST00000190584 848 ntBASIC16.6■□□□□ 0.25
VcanQ62059 Gm10576-201ENSMUST00000191927 825 ntBASIC16.6■□□□□ 0.25
VcanQ62059 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.6■□□□□ 0.25
VcanQ62059 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VcanQ62059 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.6■□□□□ 0.25
VcanQ62059 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VcanQ62059 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
VcanQ62059 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.6■□□□□ 0.25
VcanQ62059 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VcanQ62059 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
VcanQ62059 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.59■□□□□ 0.25
VcanQ62059 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.59■□□□□ 0.25
VcanQ62059 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Fst-202ENSMUST00000223640 2612 ntBASIC16.59■□□□□ 0.25
VcanQ62059 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VcanQ62059 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VcanQ62059 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VcanQ62059 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VcanQ62059 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.58■□□□□ 0.25
VcanQ62059 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.58■□□□□ 0.25
VcanQ62059 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VcanQ62059 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.58■□□□□ 0.25
VcanQ62059 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.58■□□□□ 0.25
VcanQ62059 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VcanQ62059 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.58■□□□□ 0.24
VcanQ62059 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VcanQ62059 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VcanQ62059 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VcanQ62059 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VcanQ62059 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VcanQ62059 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VcanQ62059 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.58■□□□□ 0.24
VcanQ62059 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VcanQ62059 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VcanQ62059 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.57■□□□□ 0.24
VcanQ62059 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.57■□□□□ 0.24
VcanQ62059 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.57■□□□□ 0.24
VcanQ62059 Gm12350-201ENSMUST00000121208 462 ntBASIC16.57■□□□□ 0.24
VcanQ62059 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.57■□□□□ 0.24
VcanQ62059 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VcanQ62059 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.57■□□□□ 0.24
VcanQ62059 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VcanQ62059 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VcanQ62059 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.56■□□□□ 0.24
VcanQ62059 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms