Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Odf3b-204ENSMUST00000227834 930 ntBASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav2Q5R1I9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav2Q5R1I9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Gm15565-201ENSMUST00000118890 427 ntBASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Gm21814-202ENSMUST00000203277 873 ntBASIC14.04□□□□□ -0.16
Trav2Q5R1I9 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav2Q5R1I9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav2Q5R1I9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms