Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa3Q3UPR0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Gm13146-201ENSMUST00000118508 780 ntBASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa3Q3UPR0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa3Q3UPR0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa3Q3UPR0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa3Q3UPR0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa3Q3UPR0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa3Q3UPR0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa3Q3UPR0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.2■□□□□ 0.02
Shisa3Q3UPR0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Gm7514-201ENSMUST00000209475 934 ntBASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa3Q3UPR0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa3Q3UPR0 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa3Q3UPR0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms