Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col5a2Q3U962 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.98■□□□□ 0.95
Col5a2Q3U962 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.98■□□□□ 0.95
Col5a2Q3U962 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm29791-202ENSMUST00000207888 369 ntBASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col5a2Q3U962 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col5a2Q3U962 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.96■□□□□ 0.95
Col5a2Q3U962 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.96■□□□□ 0.95
Col5a2Q3U962 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col5a2Q3U962 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.95■□□□□ 0.94
Col5a2Q3U962 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col5a2Q3U962 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.94■□□□□ 0.94
Col5a2Q3U962 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col5a2Q3U962 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.93■□□□□ 0.94
Col5a2Q3U962 Tgds-204ENSMUST00000228543 1594 ntBASIC20.92■□□□□ 0.94
Col5a2Q3U962 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Col5a2Q3U962 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.92■□□□□ 0.94
Col5a2Q3U962 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col5a2Q3U962 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms